human-protein-atlas-database
Use when you want to retrieve semi-quantitative protein expression and spatial localisation data from the Human Protein Atlas (HPA).
Skills
Find an Agent Skill for your task. Read the guide and copy the install command.
Updated 11-05 00:16
Data & analytics
17,422 results
interpro-database
Identify domains, families, and sites in proteins; find all proteins in a family or sharing a domain; explore species distribution for a domain; annotate…
jaspar-database
Query the JASPAR database for Transcription Factor (TF) binding profiles. Use when retrieving Position Frequency Matrices (PFMs) or Position Weight Matrices…
ncbi-sequence-fetch
Retrieve protein and nucleotide sequences from NCBI databases using E-utilities. Supports direct accession lookup, CDS translation, gene+organism search, locus…
openfda-database
Query, search, and download data from the openFDA API for drugs, devices, foods, tobacco, cosmetics, animal and veterinary products, substances, and…
opentargets-database
Query Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data, genetics/omics evidence, known drugs, for…
pdb-database
Use when you want to search for or download experimentally-determined 3D structures for biomolecules (proteins, nucleic acids, bound ligands). Supports…
protein-sequence-msa
Performs multiple sequence alignment of proteins with EBI Clustal Omega. Use when you need to align multiple sequences to assess similarity, domain…
protein-sequence-similarity-search
Searches for homologous protein sequences using MMseqs2 (fast, default) or BLAST (comprehensive, fallback). Trigger this whenever the user provides a protein…
pubchem-database
Query PubChem, search by name/CID/SMILES, retrieve properties, similarity/substructure searches, bioactivity, for cheminformatics. Use when a user asks about a…
pubmed-database
Search PubMed for scientific literature, including published clinical trials. Fetch abstracts and full text. Link published research to biological databases…
pymol
Visualize, analyze, and render protein and molecular structures using PyMOL. Use when the user wants to create images of protein structures, perform structural…
quickgo-database
Query the QuickGO and Evidence & Conclusion Ontology (ECO) REST API. Use this when you need to map genes to biological processes, molecular functions, or…
string-database
Query the STRING database for protein-protein interactions (PPIs), functional enrichment, and homology. Use when the user asks about interactions between…
unibind-database
Queries the UniBind database for experimentally validated transcription factor (TF) binding sites. Use when retrieving direct TF-DNA interaction datasets,…
uniprot-database
Access protein metadata, function, taxonomy, and sequences across UniProtKB, UniParc, and UniRef. Use when searching for proteins, mapping identifiers, or…
docs-changelog
Generates and formats changelog files for a new release based on provided version and raw changelog data.
alloydb-basics
Manages clusters, instances, and backups for AlloyDB for PostgreSQL, and integrates with AlloyDB Model Context Protocol (MCP) tools for automated database…
bigquery-ai-ml
Leverages BigQuery's built-in machine learning and GenAI capabilities for advanced data analytics. Use when you need to write SQL queries that perform…
bigquery-basics
Manages datasets, tables, and jobs in BigQuery. Use when you need to interact with BigQuery, run SQL queries, manage BigQuery resources (datasets, tables,…
bigquery-bigframes
Generates Python code using BigQuery DataFrames (BigFrames). Use by default for any Python data task involving BigQuery, including data processing, analysis,…
bigquery-observability
Provides data-retrieval best practices, tool selection guidance, and performant SQL query syntax for BigQuery telemetry across INFORMATION_SCHEMA, Cloud…
bigtable-basics
Assists in provisioning instances/tables, designing performant schemas, and querying data in Bigtable. Use when designing Bigtable row keys, configuring column…
cloud-databases-onboarding
Guides users through discovering their database requirements, recommends a Google Cloud database based on a recommendation matrix, and assists in database…