scvi-tools
This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial…
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Updated 11-02 00:09
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This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial…
Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species,…
Required whenever a knowledge request names or implies a country, asks what applies "here," or compares countries. Treat Country as document metadata, not as a…
Use this skill whenever the user wants tabular data from a PDF document AS A FILE — to extract, pull out, export, convert, or "put into a…
Use this skill whenever the user shares a Power BI or Analysis Services semantic model (a TMDL export, a BIM/JSON model definition, or a pasted list of tables,…
Import customer or external RDF/OWL into this repo's catalogue format. Use when user drops an RDF/OWL file and wants it catalogue-ready (metadata, category,…
Generate correct pg_durable SQL code for durable function workflows. USE WHEN: writing pg_durable DSL, creating durable functions, using df.start(), composing…
Deep learning for single-cell omics using scvi-tools — probabilistic (VAE-based) batch correction and integration with scVI, semi-supervised integration and…
Database specialist covering PostgreSQL, MongoDB, Redis, Oracle, and advanced data patterns for modern applications. Use when user asks about database schema…
R 4.4+ development specialist covering tidyverse, ggplot2, Shiny, and data science patterns. Use when developing data analysis pipelines, visualizations, or…
Build a data retention and deletion schedule grounded in legal basis. Use when asked to create a data retention policy, set retention periods, plan data…
Document a dataset so others know what it is, how it was made, and when not to use it. Use when asked to write a datasheet for a dataset, document…
Design a MotherDuck-backed customer-facing analytics app. Use when building embedded or product analytics for external users and the decision depends on…
Build a live MotherDuck dashboard as a Dive. Use when composing one shareable KPI, trend, and breakdown story over existing MotherDuck data, especially when…
Create interactive MotherDuck Dives with live SQL queries. Use when building, previewing, saving, styling, updating, or embedding a Dive, especially when the…
Decide when DuckLake is the right MotherDuck storage pattern. Use when evaluating fully managed DuckLake, BYOB, own-compute DuckLake access, data inlining,…
Roll out self-serve analytics on MotherDuck for internal teams. Use when deciding the first governed dataset, the first Dive or share, ownership boundaries,…
Plan a migration onto MotherDuck. Use when moving from Snowflake, Redshift, PostgreSQL, dbt-heavy stacks, or lakehouse tooling and the key decisions are target…
Design and build database schemas and data models in MotherDuck. Produces a file-based project scaffold. Use when creating tables, choosing data types,…
Explain MotherDuck pricing and ROI tradeoffs. Use when an economic_buyer, technical_owner, or analytics_lead is asking about spend, budget guardrails, workload…
Execute DuckDB SQL queries against MotherDuck databases. Use when running analytics, aggregations, transformations, or any SQL operation. Covers query best…
Create and manage MotherDuck data shares for zero-copy data distribution. Use when sharing databases with team members, other organizations, or making data…
Mirror CookUnity's full weekly menu into a local database so you can plan meals offline — filter by macros, diet, and budget, and diff the menu week over week,…
A URL content loading tool that extracts text or metadata from URLs across multiple platforms (YouTube, PTT, Twitter/X, Truth Social, Reddit, GitHub, and…