gene-database
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation…
Skills
Find an Agent Skill for your task. Read the guide and copy the install command.
Updated 10-28 00:17
Data & analytics
17,054 results
geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec,…
hypogenic
Automated hypothesis generation and testing using large language models. Use this skill when generating scientific hypotheses from datasets, combining…
pathml
Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. Use this skill when working with histopathology…
polars
Fast DataFrame library (Apache Arrow). Select, filter, group_by, joins, lazy evaluation, CSV/Parquet I/O, expression API, for high-performance data analysis…
pysam
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing…
pytdc
Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecular oracles, for therapeutic ML and…
string-database
Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species,…
umap-learn
UMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), supervised/parametric UMAP, for…
airflow-operator-creator
Create airflow operator creator operations. Auto-activating skill for Data Pipelines. Triggers on: airflow operator creator, airflow operator creator Part of…
dataset-loader-creator
Create dataset loader creator operations. Auto-activating skill for ML Training. Triggers on: dataset loader creator, dataset loader creator Part of the ML…
generating-database-seed-data
Process this skill enables AI assistant to generate realistic test data and database seed scripts for development and testing environments. it uses faker…
supabase-webhooks-events
Implement Supabase database webhooks, pg_net async HTTP, LISTEN/NOTIFY, and Edge Function event handlers with signature verification. Use when setting up…
astropy
Core Python library for astronomy and astrophysics workflows that need Astropy APIs, including units/quantities, coordinates, FITS I/O, tables, time systems,…
bulk-rnaseq
End-to-end bulk RNA-seq orchestrator — takes raw FASTQ reads through QC and trimming (FastQC, fastp/Trim Galore), alignment and quantification (STAR, Salmon,…
dnanexus-integration
Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Use for DNAnexus…
fluidsim
Plan, configure, inspect, restart, and analyze bounded FluidSim computational-fluid-dynamics simulations with explicit numerical-validity and HPC safety…
geomaster
Provides geospatial and Earth observation workflows using GeoPandas, Rasterio, GDAL, Xarray, Shapely, Laspy, PDAL, Google Earth Engine, and STAC/Planetary…
geopandas
Guidance and local audit CLIs for Python workflows using GeoPandas 1.1.4 GeoSeries and GeoDataFrame for planar vector data: CRS handling, geometry validity and…
histolab
Extracts tiles and preprocesses H&E whole slide images with the histolab Python library (OpenSlide), covering slide inspection, tissue masks (TissueMask,…
openpiv
Particle Image Velocimetry (PIV) analysis with OpenPIV. Use when extracting velocity fields from PIV image pairs, analyzing fluid dynamics or flow…
maodun-fenxi
Activate this skill when users face multiple intertwined problems, cannot determine priorities, and fall into decision paralysis where "everything is important." Typical trigger signals: company growth has stalled and multiple departments are reporting errors simultaneously, resources are limited but demands are unlimited, and the team argues endlessly about direction and cannot focus. Scenarios where it should not be invoked: the problem is already clear and singular, only execution is needed rather than analysis, and what the user wants is tool operation rather than strategic judgment. Difference from the "concentrate superior forces" skill: this sk...
konnect-control-plane-bootstrap
Bootstrap new Konnect Gateway control planes. Use for first-run topology, hosted versus self-hosted data planes, region/name/ownership choices, or moving from…
konnect-gateway-triage
Use when triaging Konnect Gateway control-plane and data-plane failures such as disconnected planes, missing rollout, or wrong environment slices; separate…